Neural Data Science

Neural Data Science PDF

Author: Erik Lee Nylen

Publisher: Academic Press

Published: 2017-02-24

Total Pages: 370

ISBN-13: 012804098X

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A Primer with MATLAB® and PythonTM present important information on the emergence of the use of Python, a more general purpose option to MATLAB, the preferred computation language for scientific computing and analysis in neuroscience. This book addresses the snake in the room by providing a beginner’s introduction to the principles of computation and data analysis in neuroscience, using both Python and MATLAB, giving readers the ability to transcend platform tribalism and enable coding versatility. Includes discussions of both MATLAB and Python in parallel Introduces the canonical data analysis cascade, standardizing the data analysis flow Presents tactics that strategically, tactically, and algorithmically help improve the organization of code

Analysis of Neural Data

Analysis of Neural Data PDF

Author: Robert E. Kass

Publisher: Springer

Published: 2014-07-08

Total Pages: 663

ISBN-13: 1461496020

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Continual improvements in data collection and processing have had a huge impact on brain research, producing data sets that are often large and complicated. By emphasizing a few fundamental principles, and a handful of ubiquitous techniques, Analysis of Neural Data provides a unified treatment of analytical methods that have become essential for contemporary researchers. Throughout the book ideas are illustrated with more than 100 examples drawn from the literature, ranging from electrophysiology, to neuroimaging, to behavior. By demonstrating the commonality among various statistical approaches the authors provide the crucial tools for gaining knowledge from diverse types of data. Aimed at experimentalists with only high-school level mathematics, as well as computationally-oriented neuroscientists who have limited familiarity with statistics, Analysis of Neural Data serves as both a self-contained introduction and a reference work.

The Spike

The Spike PDF

Author: Mark Humphries

Publisher: Princeton University Press

Published: 2023-01-24

Total Pages: 232

ISBN-13: 0691241481

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The story of a neural impulse and what it reveals about how our brains work We see the last cookie in the box and think, can I take that? We reach a hand out. In the 2.1 seconds that this impulse travels through our brain, billions of neurons communicate with one another, sending blips of voltage through our sensory and motor regions. Neuroscientists call these blips “spikes.” Spikes enable us to do everything: talk, eat, run, see, plan, and decide. In The Spike, Mark Humphries takes readers on the epic journey of a spike through a single, brief reaction. In vivid language, Humphries tells the story of what happens in our brain, what we know about spikes, and what we still have left to understand about them. Drawing on decades of research in neuroscience, Humphries explores how spikes are born, how they are transmitted, and how they lead us to action. He dives into previously unanswered mysteries: Why are most neurons silent? What causes neurons to fire spikes spontaneously, without input from other neurons or the outside world? Why do most spikes fail to reach any destination? Humphries presents a new vision of the brain, one where fundamental computations are carried out by spontaneous spikes that predict what will happen in the world, helping us to perceive, decide, and react quickly enough for our survival. Traversing neuroscience’s expansive terrain, The Spike follows a single electrical response to illuminate how our extraordinary brains work.

Case Studies in Neural Data Analysis

Case Studies in Neural Data Analysis PDF

Author: Mark A. Kramer

Publisher: MIT Press

Published: 2016-11-04

Total Pages: 385

ISBN-13: 0262529378

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A practical guide to neural data analysis techniques that presents sample datasets and hands-on methods for analyzing the data. As neural data becomes increasingly complex, neuroscientists now require skills in computer programming, statistics, and data analysis. This book teaches practical neural data analysis techniques by presenting example datasets and developing techniques and tools for analyzing them. Each chapter begins with a specific example of neural data, which motivates mathematical and statistical analysis methods that are then applied to the data. This practical, hands-on approach is unique among data analysis textbooks and guides, and equips the reader with the tools necessary for real-world neural data analysis. The book begins with an introduction to MATLAB, the most common programming platform in neuroscience, which is used in the book. (Readers familiar with MATLAB can skip this chapter and might decide to focus on data type or method type.) The book goes on to cover neural field data and spike train data, spectral analysis, generalized linear models, coherence, and cross-frequency coupling. Each chapter offers a stand-alone case study that can be used separately as part of a targeted investigation. The book includes some mathematical discussion but does not focus on mathematical or statistical theory, emphasizing the practical instead. References are included for readers who want to explore the theoretical more deeply. The data and accompanying MATLAB code are freely available on the authors' website. The book can be used for upper-level undergraduate or graduate courses or as a professional reference. A version of this textbook with all of the examples in Python is available on the MIT Press website.

Data Science from Scratch

Data Science from Scratch PDF

Author: Joel Grus

Publisher: "O'Reilly Media, Inc."

Published: 2015-04-14

Total Pages: 330

ISBN-13: 1491904402

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Data science libraries, frameworks, modules, and toolkits are great for doing data science, but they’re also a good way to dive into the discipline without actually understanding data science. In this book, you’ll learn how many of the most fundamental data science tools and algorithms work by implementing them from scratch. If you have an aptitude for mathematics and some programming skills, author Joel Grus will help you get comfortable with the math and statistics at the core of data science, and with hacking skills you need to get started as a data scientist. Today’s messy glut of data holds answers to questions no one’s even thought to ask. This book provides you with the know-how to dig those answers out. Get a crash course in Python Learn the basics of linear algebra, statistics, and probability—and understand how and when they're used in data science Collect, explore, clean, munge, and manipulate data Dive into the fundamentals of machine learning Implement models such as k-nearest Neighbors, Naive Bayes, linear and logistic regression, decision trees, neural networks, and clustering Explore recommender systems, natural language processing, network analysis, MapReduce, and databases

MATLAB for Neuroscientists

MATLAB for Neuroscientists PDF

Author: Pascal Wallisch

Publisher: Academic Press

Published: 2014-01-09

Total Pages: 570

ISBN-13: 0123838371

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MATLAB for Neuroscientists serves as the only complete study manual and teaching resource for MATLAB, the globally accepted standard for scientific computing, in the neurosciences and psychology. This unique introduction can be used to learn the entire empirical and experimental process (including stimulus generation, experimental control, data collection, data analysis, modeling, and more), and the 2nd Edition continues to ensure that a wide variety of computational problems can be addressed in a single programming environment. This updated edition features additional material on the creation of visual stimuli, advanced psychophysics, analysis of LFP data, choice probabilities, synchrony, and advanced spectral analysis. Users at a variety of levels—advanced undergraduates, beginning graduate students, and researchers looking to modernize their skills—will learn to design and implement their own analytical tools, and gain the fluency required to meet the computational needs of neuroscience practitioners. The first complete volume on MATLAB focusing on neuroscience and psychology applications Problem-based approach with many examples from neuroscience and cognitive psychology using real data Illustrated in full color throughout Careful tutorial approach, by authors who are award-winning educators with strong teaching experience

Statistical Learning Using Neural Networks

Statistical Learning Using Neural Networks PDF

Author: Basilio de Braganca Pereira

Publisher: CRC Press

Published: 2020-08-25

Total Pages: 286

ISBN-13: 0429775547

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Statistical Learning using Neural Networks: A Guide for Statisticians and Data Scientists with Python introduces artificial neural networks starting from the basics and increasingly demanding more effort from readers, who can learn the theory and its applications in statistical methods with concrete Python code examples. It presents a wide range of widely used statistical methodologies, applied in several research areas with Python code examples, which are available online. It is suitable for scientists and developers as well as graduate students. Key Features: Discusses applications in several research areas Covers a wide range of widely used statistical methodologies Includes Python code examples Gives numerous neural network models This book covers fundamental concepts on Neural Networks including Multivariate Statistics Neural Networks, Regression Neural Network Models, Survival Analysis Networks, Time Series Forecasting Networks, Control Chart Networks, and Statistical Inference Results. This book is suitable for both teaching and research. It introduces neural networks and is a guide for outsiders of academia working in data mining and artificial intelligence (AI). This book brings together data analysis from statistics to computer science using neural networks.

Data Science and Machine Learning

Data Science and Machine Learning PDF

Author: Dirk P. Kroese

Publisher: CRC Press

Published: 2019-11-20

Total Pages: 538

ISBN-13: 1000730778

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Focuses on mathematical understanding Presentation is self-contained, accessible, and comprehensive Full color throughout Extensive list of exercises and worked-out examples Many concrete algorithms with actual code

Data-Driven Science and Engineering

Data-Driven Science and Engineering PDF

Author: Steven L. Brunton

Publisher: Cambridge University Press

Published: 2022-05-05

Total Pages: 615

ISBN-13: 1009098489

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A textbook covering data-science and machine learning methods for modelling and control in engineering and science, with Python and MATLAB®.