Statistical Parametric Mapping: The Analysis of Functional Brain Images

Statistical Parametric Mapping: The Analysis of Functional Brain Images PDF

Author: William D. Penny

Publisher: Elsevier

Published: 2011-04-28

Total Pages: 656

ISBN-13: 0080466508

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In an age where the amount of data collected from brain imaging is increasing constantly, it is of critical importance to analyse those data within an accepted framework to ensure proper integration and comparison of the information collected. This book describes the ideas and procedures that underlie the analysis of signals produced by the brain. The aim is to understand how the brain works, in terms of its functional architecture and dynamics. This book provides the background and methodology for the analysis of all types of brain imaging data, from functional magnetic resonance imaging to magnetoencephalography. Critically, Statistical Parametric Mapping provides a widely accepted conceptual framework which allows treatment of all these different modalities. This rests on an understanding of the brain's functional anatomy and the way that measured signals are caused experimentally. The book takes the reader from the basic concepts underlying the analysis of neuroimaging data to cutting edge approaches that would be difficult to find in any other source. Critically, the material is presented in an incremental way so that the reader can understand the precedents for each new development. This book will be particularly useful to neuroscientists engaged in any form of brain mapping; who have to contend with the real-world problems of data analysis and understanding the techniques they are using. It is primarily a scientific treatment and a didactic introduction to the analysis of brain imaging data. It can be used as both a textbook for students and scientists starting to use the techniques, as well as a reference for practicing neuroscientists. The book also serves as a companion to the software packages that have been developed for brain imaging data analysis. An essential reference and companion for users of the SPM software Provides a complete description of the concepts and procedures entailed by the analysis of brain images Offers full didactic treatment of the basic mathematics behind the analysis of brain imaging data Stands as a compendium of all the advances in neuroimaging data analysis over the past decade Adopts an easy to understand and incremental approach that takes the reader from basic statistics to state of the art approaches such as Variational Bayes Structured treatment of data analysis issues that links different modalities and models Includes a series of appendices and tutorial-style chapters that makes even the most sophisticated approaches accessible

Neuroscience Databases

Neuroscience Databases PDF

Author: Rolf Kötter

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 317

ISBN-13: 1461510791

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Neuroscience Databases: A Practical Guide is the first book providing a comprehensive overview of these increasingly important databases. This volume makes the results of the Human Genome Project and other recent large-scale initiatives in the neurosciences available to a wider community. It extends the scope of bioinformatics from the molecular to the cellular, microcircuitry and systems levels, dealing for the first time with complex neuroscientific issues and leading the way to a new culture of data sharing and data mining necessary to successfully tackle neuroscience questions. Aimed at the novice user who wants to access the data, it provides clear and concise instructions on how to download the available data sets and how to use the software with a minimum of technical detail with most chapters written by the database creators themselves.

Handbook of Functional MRI Data Analysis

Handbook of Functional MRI Data Analysis PDF

Author: Russell A. Poldrack

Publisher: Cambridge University Press

Published: 2024-02-08

Total Pages: 0

ISBN-13: 9781009481168

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Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging brain function. Handbook for Functional MRI Data Analysis provides a comprehensive and practical introduction to the methods used for fMRI data analysis. Using minimal jargon, this book explains the concepts behind processing fMRI data, focusing on the techniques that are most commonly used in the field. This book provides background about the methods employed by common data analysis packages including FSL, SPM, and AFNI. Some of the newest cutting-edge techniques, including pattern classification analysis, connectivity modeling, and resting state network analysis, are also discussed. Readers of this book, whether newcomers to the field or experienced researchers, will obtain a deep and effective knowledge of how to employ fMRI analysis to ask scientific questions and become more sophisticated users of fMRI analysis software.

Handbook of Mathematical Geosciences

Handbook of Mathematical Geosciences PDF

Author: B.S. Daya Sagar

Publisher: Springer

Published: 2018-06-25

Total Pages: 914

ISBN-13: 3319789996

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This Open Access handbook published at the IAMG's 50th anniversary, presents a compilation of invited path-breaking research contributions by award-winning geoscientists who have been instrumental in shaping the IAMG. It contains 45 chapters that are categorized broadly into five parts (i) theory, (ii) general applications, (iii) exploration and resource estimation, (iv) reviews, and (v) reminiscences covering related topics like mathematical geosciences, mathematical morphology, geostatistics, fractals and multifractals, spatial statistics, multipoint geostatistics, compositional data analysis, informatics, geocomputation, numerical methods, and chaos theory in the geosciences.

Functional Neuroimaging

Functional Neuroimaging PDF

Author: Robert W. Thatcher

Publisher:

Published: 1994

Total Pages: 374

ISBN-13:

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The 1990s have been designated by congress and the president as the decade of the brain, in part due to recognition of the expansion of knowledge and technology in the realm of neuroscience. Functional neuroimaging encompasses the technique of electrophysiology (EEG), magnetoecephalography (MEG), magnetic resonance imaging (MRI), and positron emission tomography (PET). Through these techniques, high resolution, 3 dimensional anatomical information can be obtained ofthe brain and it's functioning in normal and diseases states. Neuroscientists everywhere use neuroimaging in research, and these techniques are also used regularly by clinicians, and increasingly by biopsychologists. Given the increase in the number of techniques, and their diversity of applications, there is a need for a comprehensive volume to address both the technology and function of their use. Key Features * Addresses the technical problems of image registration * Compares different approaches to inter-subject and intra-subject analysis * Explores the synergestic advantages of multivolume integration * Divided into four sections devoted to relevant, timely issues

Artificial Neural Networks and Machine Learning -- ICANN 2013

Artificial Neural Networks and Machine Learning -- ICANN 2013 PDF

Author: Valeri Mladenov

Publisher: Springer

Published: 2013-09-04

Total Pages: 643

ISBN-13: 3642407285

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The book constitutes the proceedings of the 23rd International Conference on Artificial Neural Networks, ICANN 2013, held in Sofia, Bulgaria, in September 2013. The 78 papers included in the proceedings were carefully reviewed and selected from 128 submissions. The focus of the papers is on following topics: neurofinance graphical network models, brain machine interfaces, evolutionary neural networks, neurodynamics, complex systems, neuroinformatics, neuroengineering, hybrid systems, computational biology, neural hardware, bioinspired embedded systems, and collective intelligence.

Human Brain Function

Human Brain Function PDF

Author: Karl J. Friston

Publisher: Elsevier

Published: 2004-01-26

Total Pages: 1144

ISBN-13: 9780080472959

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This updated second edition provides the state of the art perspective of the theory, practice and application of modern non-invasive imaging methods employed in exploring the structural and functional architecture of the normal and diseased human brain. Like the successful first edition, it is written by members of the Functional Imaging Laboratory - the Wellcome Trust funded London lab that has contributed much to the development of brain imaging methods and their application in the last decade. This book should excite and intrigue anyone interested in the new facts about the brain gained from neuroimaging and also those who wish to participate in this area of brain science. * Represents an almost entirely new book from 1st edition, covering the rapid advances in methods and in understanding of how human brains are organized * Reviews major advances in cognition, perception, emotion and action * Introduces novel experimental designs and analytical techniques made possible with fMRI, including event-related designs and non-linear analysis

Magnetic Resonance Brain Imaging

Magnetic Resonance Brain Imaging PDF

Author: Jörg Polzehl

Publisher: Springer Nature

Published: 2023-11-12

Total Pages: 268

ISBN-13: 3031389492

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This book discusses modelling and analysis of Magnetic Resonance Imaging (MRI) data of the human brain. For the data processing pipelines we rely on R, the software environment for statistical computing and graphics. The book is intended for readers from two communities: Statisticians, who are interested in neuroimaging and look for an introduction to the acquired data and typical scientific problems in the field and neuroimaging students, who want to learn about the statistical modeling and analysis of MRI data. Being a practical introduction, the book focuses on those problems in data analysis for which implementations within R are available. By providing full worked-out examples the book thus serves as a tutorial for MRI analysis with R, from which the reader can derive its own data processing scripts. The book starts with a short introduction into MRI. The next chapter considers the process of reading and writing common neuroimaging data formats to and from the R session. The main chapters then cover four common MR imaging modalities and their data modeling and analysis problems: functional MRI, diffusion MRI, Multi-Parameter Mapping and Inversion Recovery MRI. The book concludes with extended Appendices on details of the utilize non-parametric statistics and on resources for R and MRI data. The book also addresses the issues of reproducibility and topics like data organization and description, open data and open science. It completely relies on a dynamic report generation with knitr: The books R-code and intermediate results are available for reproducibility of the examples.